Quick info
Peter Kharchenko has worked on 11 packages so far. In total, Peter Kharchenko has worked with 18 other authors on those packages. Impressive teamwork!
Packages overview
Package details
| N2R | Fast and Scalable Approximate k-Nearest Neighbor Search Methods using 'N2' Library Peter Kharchenko , Viktor Petukhov , Dirk Eddelbuettel , Evan Biederstedt |
| conos | Clustering on Network of Samples Viktor Petukhov , Nikolas Barkas , Peter Kharchenko , Weiliang Qiu , Evan Biederstedt |
| hahmmr | Haplotype-Aware Hidden Markov Model for RNA Teng Gao , Evan Biederstedt , Peter Kharchenko |
| leidenAlg | Implements the Leiden Algorithm via an R Interface Peter Kharchenko , Viktor Petukhov , Yichen Wang , V.A. Traag , Gábor Csárdi , Tamás Nepusz , Minh Van Nguyen , Evan Biederstedt |
| liger | Lightweight Iterative Geneset Enrichment |
| numbat | Haplotype-Aware CNV Analysis from scRNA-Seq Teng Gao , Ruslan Soldatov , Hirak Sarkar , Evan Biederstedt , Peter Kharchenko |
| pagoda2 | Single Cell Analysis and Differential Expression Nikolas Barkas , Viktor Petukhov , Peter Kharchenko , Simon Steiger , Rasmus Rydbirk , Evan Biederstedt |
| scITD | Single-Cell Interpretable Tensor Decomposition Jonathan Mitchel , Evan Biederstedt , Peter Kharchenko |
| sccore | Core Utilities for Single-Cell RNA-Seq Viktor Petukhov , Rasmus Rydbirk , Peter Kharchenko , Evan Biederstedt |
| scistreer | Maximum-Likelihood Perfect Phylogeny Inference at Scale Teng Gao , Evan Biederstedt , Peter Kharchenko , Yufeng Wu |
| vrnmf | Volume-Regularized Structured Matrix Factorization Ruslan Soldatov , Peter Kharchenko , Viktor Petukhov , Evan Biederstedt |